Quantitative Biosciences

Author : Joshua S. Weitz
Publisher : Princeton University Press
ISBN 13 : 0691256489
Total Pages : 409 pages
Book Rating : 4.81/5 ( download)

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Download or read book Quantitative Biosciences written by Joshua S. Weitz and published by Princeton University Press. This book was released on 2024-01-09 with total page 409 pages. Available in PDF, EPUB and Kindle. Book excerpt: A hands-on approach to quantitative reasoning in the life sciences Quantitative Biosciences establishes the quantitative principles of how living systems work across scales, drawing on classic and modern discoveries to present a case study approach that links mechanisms, models, and measurements. Each case study is organized around a central question in the life sciences: Are mutations dependent on selection? How do cells respond to fluctuating signals in the environment? How do organisms move in flocks given local sensing? How does the size of an epidemic depend on its initial speed of spread? Each question provides the basis for introducing landmark advances in the life sciences while teaching students—whether from the life sciences, physics, computational sciences, engineering, or mathematics—how to reason quantitatively about living systems given uncertainty. Draws on real-world case studies in molecular and cellular biosciences, organismal behavior and physiology, and populations and ecological communities Stand-alone lab guides available in Python, R, and MATLAB help students move from learning in the classroom to doing research in practice Homework exercises build on the lab guides, emphasizing computational model development and analysis rather than pencil-and-paper derivations Suitable for capstone undergraduate classes, foundational graduate classes, or as part of interdisciplinary courses for students from quantitative backgrounds Can be used as part of conventional, flipped, or hybrid instruction formats Additional materials available to instructors, including lesson plans and homework solutions

Author : Joshua S. Weitz
Publisher : Princeton University Press
ISBN 13 : 0691255660
Total Pages : 272 pages
Book Rating : 4.68/5 ( download)

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Download or read book Quantitative Biosciences Companion in R written by Joshua S. Weitz and published by Princeton University Press. This book was released on 2024-03-05 with total page 272 pages. Available in PDF, EPUB and Kindle. Book excerpt: A hands-on lab guide in the R programming language that enables students in the life sciences to reason quantitatively about living systems across scales This lab guide accompanies the textbook Quantitative Biosciences, providing students with the skills they need to translate biological principles and mathematical concepts into computational models of living systems. This hands-on guide uses a case study approach organized around central questions in the life sciences, introducing landmark advances in the field while teaching students—whether from the life sciences, physics, computational sciences, engineering, or mathematics—how to reason quantitatively in the face of uncertainty. Draws on real-world case studies in molecular and cellular biosciences, organismal behavior and physiology, and populations and ecological communities Encourages good coding practices, clear and understandable modeling, and accessible presentation of results Helps students to develop a diverse repertoire of simulation approaches, enabling them to model at the appropriate scale Builds practical expertise in a range of methods, including sampling from probability distributions, stochastic branching processes, continuous time modeling, Markov chains, bifurcation analysis, partial differential equations, and agent-based simulations Bridges the gap between the classroom and research discovery, helping students to think independently, troubleshoot and resolve problems, and embark on research of their own Stand-alone computational lab guides for Quantitative Biosciences also available in Python and MATLAB

Author : Joshua S. Weitz
Publisher : Princeton University Press
ISBN 13 : 0691255687
Total Pages : 256 pages
Book Rating : 4.82/5 ( download)

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Download or read book Quantitative Biosciences Companion in MATLAB written by Joshua S. Weitz and published by Princeton University Press. This book was released on 2024-03-05 with total page 256 pages. Available in PDF, EPUB and Kindle. Book excerpt: A hands-on lab guide in the MATLAB programming language that enables students in the life sciences to reason quantitatively about living systems across scales This lab guide accompanies the textbook Quantitative Biosciences, providing students with the skills they need to translate biological principles and mathematical concepts into computational models of living systems. This hands-on guide uses a case study approach organized around central questions in the life sciences, introducing landmark advances in the field while teaching students—whether from the life sciences, physics, computational sciences, engineering, or mathematics—how to reason quantitatively in the face of uncertainty. Draws on real-world case studies in molecular and cellular biosciences, organismal behavior and physiology, and populations and ecological communities Encourages good coding practices, clear and understandable modeling, and accessible presentation of results Helps students to develop a diverse repertoire of simulation approaches, enabling them to model at the appropriate scale Builds practical expertise in a range of methods, including sampling from probability distributions, stochastic branching processes, continuous time modeling, Markov chains, bifurcation analysis, partial differential equations, and agent-based simulations Bridges the gap between the classroom and research discovery, helping students to think independently, troubleshoot and resolve problems, and embark on research of their own Stand-alone computational lab guides for Quantitative Biosciences also available in Python and R

Author : Joshua S. Weitz
Publisher : Princeton University Press
ISBN 13 : 0691259615
Total Pages : 273 pages
Book Rating : 4.11/5 ( download)

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Download or read book Quantitative Biosciences Companion in Python written by Joshua S. Weitz and published by Princeton University Press. This book was released on 2024-01-09 with total page 273 pages. Available in PDF, EPUB and Kindle. Book excerpt: A hands-on lab guide in the Python programming language that enables students in the life sciences to reason quantitatively about living systems across scales This lab guide accompanies the textbook Quantitative Biosciences, providing students with the skills they need to translate biological principles and mathematical concepts into computational models of living systems. This hands-on guide uses a case study approach organized around central questions in the life sciences, introducing landmark advances in the field while teaching students—whether from the life sciences, physics, computational sciences, engineering, or mathematics—how to reason quantitatively in the face of uncertainty. Draws on real-world case studies in molecular and cellular biosciences, organismal behavior and physiology, and populations and ecological communities Encourages good coding practices, clear and understandable modeling, and accessible presentation of results Helps students to develop a diverse repertoire of simulation approaches, enabling them to model at the appropriate scale Builds practical expertise in a range of methods, including sampling from probability distributions, stochastic branching processes, continuous time modeling, Markov chains, bifurcation analysis, partial differential equations, and agent-based simulations Bridges the gap between the classroom and research discovery, helping students to think independently, troubleshoot and resolve problems, and embark on research of their own Stand-alone computational lab guides for Quantitative Biosciences also available in R and MATLAB

Author : Joshua S. Weitz
Publisher : Princeton University Press
ISBN 13 : 0691259607
Total Pages : 273 pages
Book Rating : 4.04/5 ( download)

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Download or read book Quantitative Biosciences Companion in R written by Joshua S. Weitz and published by Princeton University Press. This book was released on 2024-01-09 with total page 273 pages. Available in PDF, EPUB and Kindle. Book excerpt: A hands-on lab guide in the R programming language that enables students in the life sciences to reason quantitatively about living systems across scales This lab guide accompanies the textbook Quantitative Biosciences, providing students with the skills they need to translate biological principles and mathematical concepts into computational models of living systems. This hands-on guide uses a case study approach organized around central questions in the life sciences, introducing landmark advances in the field while teaching students—whether from the life sciences, physics, computational sciences, engineering, or mathematics—how to reason quantitatively in the face of uncertainty. Draws on real-world case studies in molecular and cellular biosciences, organismal behavior and physiology, and populations and ecological communities Encourages good coding practices, clear and understandable modeling, and accessible presentation of results Helps students to develop a diverse repertoire of simulation approaches, enabling them to model at the appropriate scale Builds practical expertise in a range of methods, including sampling from probability distributions, stochastic branching processes, continuous time modeling, Markov chains, bifurcation analysis, partial differential equations, and agent-based simulations Bridges the gap between the classroom and research discovery, helping students to think independently, troubleshoot and resolve problems, and embark on research of their own Stand-alone computational lab guides for Quantitative Biosciences also available in Python and MATLAB

Author : Thomas M. Nordlund
Publisher : CRC Press
ISBN 13 : 1439891133
Total Pages : 578 pages
Book Rating : 4.31/5 ( download)

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Download or read book Quantitative Understanding of Biosystems written by Thomas M. Nordlund and published by CRC Press. This book was released on 2011-03-04 with total page 578 pages. Available in PDF, EPUB and Kindle. Book excerpt: Quantitative Understanding of Biosystems: An Introduction to Biophysics focuses on the behavior and properties of microscopic structures that underlie living systems. It clearly describes the biological physics of macromolecules, subcellular structures, and whole cells, including interactions with light.Providing broad coverage of physics, chemistr

Author : Akatsuki Kimura
Publisher : Springer Nature
ISBN 13 : 9811650187
Total Pages : 130 pages
Book Rating : 4.85/5 ( download)

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Download or read book Quantitative Biology written by Akatsuki Kimura and published by Springer Nature. This book was released on 2022-01-04 with total page 130 pages. Available in PDF, EPUB and Kindle. Book excerpt: This textbook is for biologists, to conduct quantitative analysis and modeling of biological processes at molecular and cellular levels. Focusing on practical concepts and techniques for everyday research, this text will enable beginners, both students and established biologists, to take the first step in quantitative biology. It also provides step-by-step tutorials to run various sample programs in one’s personal computer using Excel and Python. This volume traces topics, starting with an introductory chapter, such as modeling, construction and execution of numerical models, and key concepts in quantitative biology: feedback regulations, fluctuations and randomness, and statistical analyses. It also provide sample codes with guidance to procedure programming for actual biological processes such as movement of the nucleus within a cell, cell-cycle regulation, stripe pattern formation of skins, and distribution of energy. Written by a leading research scientist who has a background in biology, studied quantitative approaches by himself, and teaches quantitative biology at several universities, this textbook broadens quantitative approaches for biologists who do not have a strong background in mathematics, physics, or computer programming, and helps them progress further in their research.

Author : Nicholas F. Parrish
Publisher : Springer Nature
ISBN 13 : 107162380X
Total Pages : 398 pages
Book Rating : 4.00/5 ( download)

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Download or read book piRNA written by Nicholas F. Parrish and published by Springer Nature. This book was released on 2022-07-07 with total page 398 pages. Available in PDF, EPUB and Kindle. Book excerpt: This detailed volume explores newly-developed methods in PIWI-interacting RNAs (piRNAs) research, methods currently applied to other ncRNAs involved in nuclear regulation which can be used to study piRNAs, and piRNA methods applied in non-classical organisms. It also includes several bioinformatic and biophysical methods related to piRNA studies, consistent with the increasing importance of high-throughput sequencing and computational methods. Written for the highly successful Methods in Molecular Biology series, chapters include introductions to their respective topics, lists of the necessary materials, step-by-step, readily reproducible protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and up-to-date, piRNA: Methods and Protocols serves as an ideal guide for researchers seeking to elucidate the numerous mysteries of this area of multicellular biology.

Author :
Publisher : Elsevier
ISBN 13 : 0081026919
Total Pages : 4266 pages
Book Rating : 4.15/5 ( download)

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Download or read book Comprehensive Natural Products III written by and published by Elsevier. This book was released on 2020-07-22 with total page 4266 pages. Available in PDF, EPUB and Kindle. Book excerpt: Comprehensive Natural Products III, Third Edition, Seven Volume Set updates and complements the previous two editions, including recent advances in cofactor chemistry, structural diversity of natural products and secondary metabolites, enzymes and enzyme mechanisms and new bioinformatics tools. Natural products research is a dynamic discipline at the intersection of chemistry and biology concerned with isolation, identification, structure elucidation, and chemical characteristics of naturally occurring compounds such as pheromones, carbohydrates, nucleic acids and enzymes. This book reviews the accumulated efforts of chemical and biological research to understand living organisms and their distinctive effects on health and medicine and to stimulate new ideas among the established natural products community. Provides readers with an in-depth review of current natural products research and a critical insight into the future direction of the field Bridges the gap in knowledge by covering developments in the field since the second edition published in 2010 Split into 7 sections on key topics to allow students, researchers and professionals to find relevant information quickly and easily Ensures that the knowledge within is easily understood by and applicable to a large audience

Author : N.D. Gallant
Publisher : Elsevier Inc. Chapters
ISBN 13 : 012809169X
Total Pages : 334 pages
Book Rating : 4.92/5 ( download)

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Download or read book Characterization of biomaterials written by N.D. Gallant and published by Elsevier Inc. Chapters. This book was released on 2012-12-19 with total page 334 pages. Available in PDF, EPUB and Kindle. Book excerpt: This chapter reviews the quantification of cell adhesion and motility with a focus on the assays that enable these analyses. A description of these critical biological processes is provided and the characteristic parameters are described. Each assay is then classified according to the metrics used to quantify cell adhesion or locomotion. Finally, some recent advances and future prospects for the field are presented.