The Tomato Genome

Author : Mathilde Causse
Publisher : Springer
ISBN 13 : 3662533898
Total Pages : 259 pages
Book Rating : 4.95/5 ( download)

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Download or read book The Tomato Genome written by Mathilde Causse and published by Springer. This book was released on 2016-11-21 with total page 259 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book describes the strategy used for sequencing, assembling and annotating the tomato genome and presents the main characteristics of this sequence with a special focus on repeated sequences and the ancestral polyploidy events. It also includes the chloroplast and mitochondrial genomes. Tomato (Solanum lycopersicum) is a major crop plant as well as a model for fruit development, and the availability of the genome sequence has completely changed the paradigm of the species’ genetics and genomics. The book describes the numerous genetic and genomic resources available, the identified genes and quantitative trait locus (QTL) identified, as well as the strong synteny across Solanaceae species. Lastly, it discusses the consequences of the availability of a high-quality genome sequence of the cultivated species for the research community. It is a valuable resource for students and researchers interested in the genetics and genomics of tomato and Solanaceae.

Author : Barbara E. Liedl
Publisher : CRC Press
ISBN 13 : 1578088046
Total Pages : 522 pages
Book Rating : 4.41/5 ( download)

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Download or read book Genetics, Genomics, and Breeding of Tomato written by Barbara E. Liedl and published by CRC Press. This book was released on 2013-01-17 with total page 522 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume covers the advances in the study of tomato diversity and taxonomy. It examines the mapping of simple and complex traits, classical genetics and breeding, association studies, molecular breeding, positional cloning, and structural and comparative genomics. The contributors also discuss transcriptomics, proteomics, metabolomics, and bioinformatics. The information in this book will be useful to researchers working on other Solanaceaous crops as well as those interested in using the tomato as a model crop species.

Author : Adrian Srb
Publisher : Springer
ISBN 13 : 9781468428827
Total Pages : 0 pages
Book Rating : 4.29/5 ( download)

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Download or read book Genes, Enzymes, and Populations written by Adrian Srb and published by Springer. This book was released on 2012-06-14 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: The present volume includes the large majority of papers given at the symposium entitled "Fundamental Approaches to Plant and Animal Improvement," held at Cali, Colombia, in November, 1972. The primary focal points were on various genetic mechanisms, including gene action and mutation, the development of phenotypic attributes, and on evolution, including that controlled by man for agricultural purposes. In fact, very little referring in any particular way to animal improvement was included, while a great deal of attention was paid to higher plants and to microorganisms. On the other hand, both the population genetics of insects and insect control were considered. Thus Genes, Enzymes, and Populations, the title given to this published work, seems to me to represent somewhat more fairly the contents than does the original symposium title. Given the intent of the symposium, which is expressed in the original title, the published record cannot be expected to be a neatly packaged presentation of some highly defined subject matter. Indeed the diverse subjects represent some, but by no means all, of the varied and dynamic scientific activities that need to be components in the improvement and production of agriculturally Significant plants at a time when world populations are rapidly increasing and shortages of food occurring. In any case, the organizers of the symposium wisely decided that considerations of environment as well as of genetics should be introduced into the thinking of the group and that physiology and molecular biology could not be ignored.

Author : Domenico Carputo
Publisher : Springer Nature
ISBN 13 : 3030303438
Total Pages : 250 pages
Book Rating : 4.33/5 ( download)

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Download or read book The Wild Solanums Genomes written by Domenico Carputo and published by Springer Nature. This book was released on 2021-09-21 with total page 250 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book gathers the latest information on the organization of genomes in wild Solanum species and emphasizes how this information is yielding direct outcomes in the fields of molecular breeding, as well as a better understanding of both the patterns and processes of evolution. Cultivated Solanums, such as potato, tomato, and pepper, possess a high number of wild relatives that are of great importance for practical breeding and evolutionary studies. Their germplasm is often characterized by allelic diversity, as well as genes that are lacking in the cultivated species. Wild Solanums have not been fully exploited by breeders. This is mainly due to the lack of information regarding their genetics and genomics. However, the genome of important cultivated Solanaceae such as potato, tomato, eggplant, and pepper has already been sequenced. On the heels of these recent developments, wild Solanum genomes are now becoming available, opening an exciting new era for both basic research and varietal development in the Solanaceae.

Author : Nagasaki Nagasaki Press
Publisher :
ISBN 13 : 9781523797776
Total Pages : 44 pages
Book Rating : 4.70/5 ( download)

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Download or read book High-Frequency, Precise Modification of the Tomato Genome written by Nagasaki Nagasaki Press and published by . This book was released on 2016-01-31 with total page 44 pages. Available in PDF, EPUB and Kindle. Book excerpt: The use of homologous recombination to precisely modify plant genomes has been challenging, due to the lack of efficient methods for delivering DNA repair templates to plant cells. Even with the advent of sequence-specific nucleases, which stimulate homologous recombination at predefined genomic sites by creating targeted DNA double-strand breaks, there are only a handful of studies that report precise editing of endogenous genes in crop plants. More efficient methods are needed to modify plant genomes through homologous recombination, ideally without randomly integrating foreign DNA. High-frequency, precise modification of the tomato genome was achieved using geminivirus replicons, suggesting that these vectors can overcome the efficiency barrier that has made gene targeting in plants challenging. This work provides a foundation for efficient genome editing of crop genomes without the random integration of foreign DNA.

Author : Pierre Broun
Publisher :
ISBN 13 :
Total Pages : 154 pages
Book Rating : 4.95/5 ( download)

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Download or read book Characterization of Hypervariable Regions in the Tomato Genome (Lycopersicon Esculentum) written by Pierre Broun and published by . This book was released on 1994 with total page 154 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Author : John I. Yoder
Publisher : CRC Press
ISBN 13 :
Total Pages : 352 pages
Book Rating : 4.05/5 ( download)

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Download or read book Molecular Biology of the Tomato written by John I. Yoder and published by CRC Press. This book was released on 1993-07-15 with total page 352 pages. Available in PDF, EPUB and Kindle. Book excerpt: The ideal fresh market tomato; Sunseeds: the challenge of breeding processing tomatoes; Specialised requirements for producing transgenic glasshouse tomatoes; Development and application of a molecular linkage map in tomato; Integration of the classical and molecular linkage maps of tomato chromosome; Recombinant inbred populations for high resolution mapping in tomato; Mapping quantitative genes involved in a trait assessed on an ordinal scale: a case study with bacterial cankel in Lycopersicon peruvianum; Studies towards a genetic and molecular analysis of paramutation at the Sulfurea locus of Lycopersion esculentum Mill; Evaluation the prospects of transposon tagging in tomato by the use of endogenous genetic markers; Transposon induced chromosomal rearracrearrangements; The role of HMGCoA reductase in tomato fruit development; Plant hormone and photomorphogenic mutants of tomato; Auxin perception and the regulation of tomato growth and development; Self-incompatibility in the solanaceae; Molecular analysis of gene regulation and function during pollen development; Tissue-specific gene expression in tomato pistils; Molecular mapping of flower development in tomato; Genetic control of ethylene and carotenoid production in transgenic tomatoes; Inhibition of ripening in transgenic tomato plants expressing ACC deaminase; Regulation and function of the E8 fruit ripening gene from tomato; Inhibition of fruit senescence; Molecular biology of tomato yellow leaf curl virus (TYLCV) and potential ways to control disease.

Author : Palmiro Poltronieri
Publisher : Woodhead Publishing
ISBN 13 : 0081000715
Total Pages : 354 pages
Book Rating : 4.17/5 ( download)

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Download or read book Applied Plant Genomics and Biotechnology written by Palmiro Poltronieri and published by Woodhead Publishing. This book was released on 2015-01-27 with total page 354 pages. Available in PDF, EPUB and Kindle. Book excerpt: Applied plant genomics and biotechnology reviews the recent advancements in the post-genomic era, discussing how different varieties respond to abiotic and biotic stresses, investigating epigenetic modifications and epigenetic memory through analysis of DNA methylation states, applicative uses of RNA silencing and RNA interference in plant physiology and in experimental transgenics, and plants modified to produce high-value pharmaceutical proteins. The book provides an overview of research advances in application of RNA silencing and RNA interference, through Virus-based transient gene expression systems, Virus induced gene complementation (VIGC), Virus induced gene silencing (Sir VIGS, Mr VIGS) Virus-based microRNA silencing (VbMS) and Virus-based RNA mobility assays (VRMA); RNA based vaccines and expression of virus proteins or RNA, and virus-like particles in plants, the potential of virus vaccines and therapeutics, and exploring plants as factories for useful products and pharmaceuticals are topics wholly deepened. The book reviews and discuss Plant Functional Genomic studies discussing the technologies supporting the genetic improvement of plants and the production of plant varieties more resistant to biotic and abiotic stresses. Several important crops are analysed providing a glimpse on the most up-to-date methods and topics of investigation. The book presents a review on current state of GMO, the cisgenesis-derived plants and novel plant products devoid of transgene elements, discuss their regulation and the production of desired traits such as resistance to viruses and disease also in fruit trees and wood trees with long vegetative periods. Several chapters cover aspects of plant physiology related to plant improvement: cytokinin metabolism and hormone signaling pathways are discussed in barley; PARP-domain proteins involved in Stress-Induced Morphogenetic Response, regulation of NAD signaling and ROS dependent synthesis of anthocyanins. Apple allergen isoforms and the various content in different varieties are discussed and approaches to reduce their presence. Euphorbiaceae, castor bean, cassava and Jathropa are discussed at genomic structure, their diseases and viruses, and methods of transformation. Rice genomics and agricultural traits are discussed, and biotechnology for engineering and improve rice varieties. Mango topics are presented with an overview of molecular methods for variety differentiation, and aspects of fruit improvement by traditional and biotechnology methods. Oilseed rape is presented, discussing the genetic diversity, quality traits, genetic maps, genomic selection and comparative genomics for improvement of varieties. Tomato studies are presented, with an overview on the knowledge of the regulatory networks involved in flowering, methods applied to study the tomato genome-wide DNA methylation, its regulation by small RNAs, microRNA-dependent control of transcription factors expression, the development and ripening processes in tomato, genomic studies and fruit modelling to establish fleshy fruit traits of interest; the gene reprogramming during fruit ripening, and the ethylene dependent and independent DNA methylation changes. provides an overview on the ongoing projects and activities in the field of applied biotechnology includes examples of different crops and applications to be exploited reviews and discusses Plant Functional Genomic studies and the future developments in the field explores the new technologies supporting the genetic improvement of plants

Author : Amir Muhammed
Publisher : Springer Science & Business Media
ISBN 13 : 1468428861
Total Pages : 493 pages
Book Rating : 4.65/5 ( download)

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Download or read book Genetic Diversity in Plants written by Amir Muhammed and published by Springer Science & Business Media. This book was released on 2012-12-06 with total page 493 pages. Available in PDF, EPUB and Kindle. Book excerpt: For the last eighteen years we have been deeply involved in a cooperative effort with our Latin American colleagues in genetics, biochemistry, physiology, and molecular biology. We have been in close contact with scientists in a number of centers and have helped to organize symposia, workshops, and so forth, in an effort to accelerate their development and make their substantial work known. These symposia in Latin America have been quite successful. The fifteenth will take place in Brasilia in 1977. At the request of colleagues, we are in the process of developing a similar series in Asia. The first very successful symposium was held in Calcutta in 1973. We were most pleased when Dr. Amir Muhammed, Vice Chancellor of the University of Agriculture, Lyallpur suggested that we hold a symposium on a topic of great importance to Pakistan, Genetic Control of Diversity in Plants, under the auspices of the University of Agriculture. It is our hope that this symposium will be followed by additional ones in Pakistan as well as in other countries in the Far East. Leadership is quickly developing in the hands of outstanding scientists in these countries, and we appreciate the opportunity to cooperate with them. We are especially grateful to the Natiohal Science Foundation for makingPL- 480 funds available which made this symposium possible.

Author : Jean-Nicolas Volff
Publisher : Karger Medical and Scientific Publishers
ISBN 13 : 3805584911
Total Pages : 155 pages
Book Rating : 4.13/5 ( download)

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Download or read book Plant Genomes written by Jean-Nicolas Volff and published by Karger Medical and Scientific Publishers. This book was released on 2008-01-01 with total page 155 pages. Available in PDF, EPUB and Kindle. Book excerpt: Recent major advances in the field of comparative genomics and cytogenomics of plants, particularly associated with the completion of ambitious genome projects, have uncovered astonishing facets of the architecture and evolutionary history of plant genomes. The aim of this book was to review these recent developments as well as their implications in our understanding of the mechanisms which drive plant diversity. New insights into the evolution of gene functions, gene families and genome size are presented, with particular emphasis on the evolutionary impact of polyploidization and transposable elements. Knowledge on the structure and evolution of plant sex chromosomes, centromeres and microRNAs is reviewed and updated. Taken together, the contributions by internationally recognized experts present a panoramic overview of the structural features and evolutionary dynamics of plant genomes.This volume of Genome Dynamics will provide researchers, teachers and students in the fields of biology and agronomy with a valuable source of current knowledge on plant genomes.