Mbn Explorer And Mbn Studio Tutorials

Author : Ilia Solov'yov
Publisher : Createspace Independent Publishing Platform
ISBN 13 : 9781976460920
Total Pages : 288 pages
Book Rating : 4.21/5 ( download)

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Download or read book Mbn Explorer and Mbn Studio Tutorials written by Ilia Solov'yov and published by Createspace Independent Publishing Platform. This book was released on 2017-10-20 with total page 288 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book describes the practical exercises with MesoBioNano (MBN) Explorer and MBN Studio software packages introducing and illustrating a broad range of applications of the software in various fields. The standard and unique algorithms for molecular and Monte Carlo dynamics and for optimisation of complex molecular systems are introduced and explained in details invoking illustrative case studies. MBN Explorer is a multi-purpose software package for advanced multiscale simulations of complex molecular structure and dynamics. It has many unique features and a wide range of applications in Physics, Chemistry, Biology, Materials Science, and Industry. A broad variety of algorithms and interatomic potentials implemented in the program allow simulations of structure and dynamics of a broad range of systems with the sizes from the atomic up to the mesoscopic scales. MBN Explorer is available for Windows, Linux, and macOS. It is fully parallelised and can be exploited on computer clusters and supercomputers. MBN Studio is a special multi-task software toolkit with a graphical user interface for MBN Explorer. It helps setting up calculations with MBN Explorer, monitoring their progress and examining the calculation results. The graphical utility enables to visualise selected inputs and outputs. A number of built-in tools allow for the calculation and analysis of specific systems' characteristics. A special modelling plug-in allows constructing a large variety of molecular systems built of arbitrary atomic and molecular constituents. MBN Explorer and MBN Studio are being developed and distributed by MBN Research Center. For more details visit the MBN Research Center website: www.mbnresearch.com

Author : Ilia A. Solov’yov
Publisher : Springer
ISBN 13 : 3319560875
Total Pages : 451 pages
Book Rating : 4.78/5 ( download)

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Download or read book Multiscale Modeling of Complex Molecular Structure and Dynamics with MBN Explorer written by Ilia A. Solov’yov and published by Springer. This book was released on 2017-05-16 with total page 451 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book introduces readers to MesoBioNano (MBN) Explorer – a multi-purpose software package designed to model molecular systems at various levels of size and complexity. In addition, it presents a specially designed multi-task toolkit and interface – the MBN Studio – which enables the set-up of input files, controls the simulations, and supports the subsequent visualization and analysis of the results obtained. The book subsequently provides a systematic description of the capabilities of this universal and powerful software package within the framework of computational molecular science, and guides readers through its applications in numerous areas of research in bio- and chemical physics and material science – ranging from the nano- to the mesoscale. MBN Explorer is particularly suited to computing the system’s energy, to optimizing molecular structure, and to exploring the various facets of molecular and random walk dynamics. The package allows the use of a broad variety of interatomic potentials and can, e.g., be configured to select any subset of a molecular system as rigid fragments, whenever a significant reduction in the number of dynamical degrees of freedom is required for computational practicalities. MBN Studio enables users to easily construct initial geometries for the molecular, liquid, crystalline, gaseous and hybrid systems that serve as input for the subsequent simulations of their physical and chemical properties using MBN Explorer. Despite its universality, the computational efficiency of MBN Explorer is comparable to that of other, more specialized software packages, making it a viable multi-purpose alternative for the computational modeling of complex molecular systems. A number of detailed case studies presented in the second part of this book demonstrate MBN Explorer’s usefulness and efficiency in the fields of atomic clusters and nanoparticles, biomolecular systems, nanostructured materials, composite materials and hybrid systems, crystals, liquids and gases, as well as in providing modeling support for novel and emerging technologies. Last but not least, with the release of the 3rd edition of MBN Explorer in spring 2017, a free trial version will be available from the MBN Research Center website (mbnresearch.com).

Author : Ilia A. Solov'yov
Publisher : Springer Nature
ISBN 13 : 3030992918
Total Pages : 554 pages
Book Rating : 4.10/5 ( download)

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Download or read book Dynamics of Systems on the Nanoscale written by Ilia A. Solov'yov and published by Springer Nature. This book was released on 2022-06-03 with total page 554 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents the structure formation and dynamics of animate and inanimate matter on the nanometre scale. This is a new interdisciplinary field known as Meso-Bio-Nano (MBN) science that lies at the intersection of physics, chemistry, biology and material science. Special attention in the book is devoted to investigations of the structure, properties and dynamics of complex MBN systems by means of photonic, electronic, heavy particle and atomic collisions. This includes problems of fusion and fission, fragmentation, surfaces and interfaces, reactivity, nanoscale phase and morphological transitions, irradiation-driven transformations of complex molecular systems, collective electron excitations, radiation damage and biodamage, channeling phenomena and many more. Emphasis in the book is placed on the theoretical and computational physics research advances in these areas and related state-of-the-art experiments. Particular attention in the book is devoted to the utilization of advanced computational techniques and high-performance computing in studies of the dynamics of systems.

Author : Andrey V. Solov’yov
Publisher : Springer
ISBN 13 : 3319430300
Total Pages : 498 pages
Book Rating : 4.00/5 ( download)

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Download or read book Nanoscale Insights into Ion-Beam Cancer Therapy written by Andrey V. Solov’yov and published by Springer. This book was released on 2016-12-07 with total page 498 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides a unique and comprehensive overview of state-of-the-art understanding of the molecular and nano-scale processes that play significant roles in ion-beam cancer therapy. It covers experimental design and methodology, and reviews the theoretical understanding of the processes involved. It offers the reader an opportunity to learn from a coherent approach about the physics, chemistry and biology relevant to ion-beam cancer therapy, a growing field of important medical application worldwide. The book describes phenomena occurring on different time and energy scales relevant to the radiation damage of biological targets and ion-beam cancer therapy from the molecular (nano) scale up to the macroscopic level. It illustrates how ion-beam therapy offers the possibility of excellent dose localization for treatment of malignant tumours, minimizing radiation damage in normal tissue whilst maximizing cell-killing within the tumour, offering a significant development in cancer therapy. The full potential of such therapy can only be realized by better understanding the physical, chemical and biological mechanisms, on a range of time and space scales that lead to cell death under ion irradiation. This book describes how, using a multiscale approach, experimental and theoretical expertise available can lead to greater insight at the nanoscopic and molecular level into radiation damage of biological targets induced by ion impact. The book is intended for advanced students and specialists in the areas of physics, chemistry, biology and medicine related to ion-beam therapy, radiation protection, biophysics, radiation nanophysics and chemistry, atomic and molecular physics, condensed matter physics, and the physics of interaction of charged particles with matter. One of the most important features of the book is the inclusive multiscale approach to the understanding of complex and highly interdisciplinary processes behind ion-beam cancer therapy, which stretches from the atomistic level up to the biological scale and is demonstrated to be in excellent agreement with experimental observations.

Author : Ilia A. Solov’yov
Publisher : Springer
ISBN 13 : 9783319560854
Total Pages : 0 pages
Book Rating : 4.59/5 ( download)

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Download or read book Multiscale Modeling of Complex Molecular Structure and Dynamics with MBN Explorer written by Ilia A. Solov’yov and published by Springer. This book was released on 2017-05-24 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book introduces readers to MesoBioNano (MBN) Explorer – a multi-purpose software package designed to model molecular systems at various levels of size and complexity. In addition, it presents a specially designed multi-task toolkit and interface – the MBN Studio – which enables the set-up of input files, controls the simulations, and supports the subsequent visualization and analysis of the results obtained. The book subsequently provides a systematic description of the capabilities of this universal and powerful software package within the framework of computational molecular science, and guides readers through its applications in numerous areas of research in bio- and chemical physics and material science – ranging from the nano- to the mesoscale. MBN Explorer is particularly suited to computing the system’s energy, to optimizing molecular structure, and to exploring the various facets of molecular and random walk dynamics. The package allows the use of a broad variety of interatomic potentials and can, e.g., be configured to select any subset of a molecular system as rigid fragments, whenever a significant reduction in the number of dynamical degrees of freedom is required for computational practicalities. MBN Studio enables users to easily construct initial geometries for the molecular, liquid, crystalline, gaseous and hybrid systems that serve as input for the subsequent simulations of their physical and chemical properties using MBN Explorer. Despite its universality, the computational efficiency of MBN Explorer is comparable to that of other, more specialized software packages, making it a viable multi-purpose alternative for the computational modeling of complex molecular systems. A number of detailed case studies presented in the second part of this book demonstrate MBN Explorer’s usefulness and efficiency in the fields of atomic clusters and nanoparticles, biomolecular systems, nanostructured materials, composite materials and hybrid systems, crystals, liquids and gases, as well as in providing modeling support for novel and emerging technologies. Last but not least, with the release of the 3rd edition of MBN Explorer in spring 2017, a free trial version will be available from the MBN Research Center website (mbnresearch.com).

Author : Stephen Boyd
Publisher : Cambridge University Press
ISBN 13 : 1316518965
Total Pages : 477 pages
Book Rating : 4.60/5 ( download)

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Download or read book Introduction to Applied Linear Algebra written by Stephen Boyd and published by Cambridge University Press. This book was released on 2018-06-07 with total page 477 pages. Available in PDF, EPUB and Kindle. Book excerpt: A groundbreaking introduction to vectors, matrices, and least squares for engineering applications, offering a wealth of practical examples.

Author : Andrey V. Solov’yov
Publisher : Springer
ISBN 13 : 9783319827209
Total Pages : 0 pages
Book Rating : 4.00/5 ( download)

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Download or read book Nanoscale Insights into Ion-Beam Cancer Therapy written by Andrey V. Solov’yov and published by Springer. This book was released on 2018-07-04 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides a unique and comprehensive overview of state-of-the-art understanding of the molecular and nano-scale processes that play significant roles in ion-beam cancer therapy. It covers experimental design and methodology, and reviews the theoretical understanding of the processes involved. It offers the reader an opportunity to learn from a coherent approach about the physics, chemistry and biology relevant to ion-beam cancer therapy, a growing field of important medical application worldwide. The book describes phenomena occurring on different time and energy scales relevant to the radiation damage of biological targets and ion-beam cancer therapy from the molecular (nano) scale up to the macroscopic level. It illustrates how ion-beam therapy offers the possibility of excellent dose localization for treatment of malignant tumours, minimizing radiation damage in normal tissue whilst maximizing cell-killing within the tumour, offering a significant development in cancer therapy. The full potential of such therapy can only be realized by better understanding the physical, chemical and biological mechanisms, on a range of time and space scales that lead to cell death under ion irradiation. This book describes how, using a multiscale approach, experimental and theoretical expertise available can lead to greater insight at the nanoscopic and molecular level into radiation damage of biological targets induced by ion impact. The book is intended for advanced students and specialists in the areas of physics, chemistry, biology and medicine related to ion-beam therapy, radiation protection, biophysics, radiation nanophysics and chemistry, atomic and molecular physics, condensed matter physics, and the physics of interaction of charged particles with matter. One of the most important features of the book is the inclusive multiscale approach to the understanding of complex and highly interdisciplinary processes behind ion-beam cancer therapy, which stretches from the atomistic level up to the biological scale and is demonstrated to be in excellent agreement with experimental observations.

Author : Susan Kahler
Publisher :
ISBN 13 : 9781952365041
Total Pages : 112 pages
Book Rating : 4.4X/5 ( download)

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Download or read book Computer Vision with SAS written by Susan Kahler and published by . This book was released on 2020-07-22 with total page 112 pages. Available in PDF, EPUB and Kindle. Book excerpt: Computer vision is a field of artificial intelligence that trains computers to interpret and understand the visual world. In recent years, computer vision has begun to rival and even surpass human visual abilities in many areas. SAS offers many different solutions to train computers to "see" by identifying and classifying objects, and several groundbreaking papers have been written to demonstrate these techniques. The papers included in this special collection demonstrate how the latest computer vision tools and techniques can be used to solve a variety of business problems.

Author : Andrey V. Korol
Publisher : Springer
ISBN 13 : 3642549330
Total Pages : 290 pages
Book Rating : 4.35/5 ( download)

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Download or read book Channeling and Radiation in Periodically Bent Crystals written by Andrey V. Korol and published by Springer. This book was released on 2014-05-13 with total page 290 pages. Available in PDF, EPUB and Kindle. Book excerpt: The development of coherent radiation sources for sub-angstrom wavelengths - i.e. in the hard X-ray and gamma-ray range - is a challenging goal of modern physics. The availability of such sources will have many applications in basic science, technology and medicine and in particular, they may have a revolutionary impact on nuclear and solid state physics, as well as on the life sciences. The present state-of-the-art lasers are capable of emitting electromagnetic radiation from the infrared to the ultraviolet, while free electron lasers (X-FELs) are now entering the soft X-ray region. Moving further, i.e. into the hard X and/or gamma ray band, however, is not possible without new approaches and technologies. In this book we introduce and discuss one such novel approach -the radiation formed in a Crystalline Undulator - whereby electromagnetic radiation is generated by a bunch of ultra-relativistic particles channeling through a periodically bent crystalline structure. Under certain conditions, such a device can emit intensive spontaneous monochromatic radiation and even reach the coherence of laser light sources. Readers will be presented with the underlying fundamental physics and be familiarized with the theoretical, experimental and technological advances made during the last one and a half decades in exploring the various features of investigations into crystalline undulators. This research draws upon knowledge from many research fields - such as materials science, beam physics, the physics of radiation, solid state physics and acoustics, to name but a few. Accordingly, much care has been taken by the authors to make the book as self-contained as possible in this respect, so as to also provide a useful introduction to this emerging field to a broad readership of researchers and scientist with various backgrounds. This new edition has been revised and extended to take recent developments in the field into account.

Author : David Seidner
Publisher : Rizzoli International Publications
ISBN 13 :
Total Pages : 228 pages
Book Rating : 4.36/5 ( download)

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Download or read book Artists at Work written by David Seidner and published by Rizzoli International Publications. This book was released on 1999 with total page 228 pages. Available in PDF, EPUB and Kindle. Book excerpt: Ross Bleckner, Christian Boltanski, Louise Bourgeois, John Cage, Chuck Close, Roy Lichtenstein, Roni Horn, Brice Marden, Joan Mitchell, Jack Pierson, Richard Serra, Philip Taaffe, Cy Twombly, Terry Winters, Francesco Clemente, Milton Resnick, Felix Gonzales-Torres, Julian Lethbridge, Cindy Sherman, Jasper Johns.